The detailed information of tRNA gene sequence


Sequence ID>WENV180098689
Genome IDMTBK01261350
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1692
End posion on genome 1603
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcgctggac
tRNA gene sequence 
GGAGGTGTGTCCGAACTGGCTAAGGAGCCGGTCTTGAAAATCGGTGGTGGTCAAACCACC
GTGTGGGTTCGAATCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
ttttttattc
Secondary structure (Cloverleaf model)
>WENV180098689	Ser	TGA
                   c      GCCA ttttttattc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G C C T       G T G G G     C
    G         | | |                 T T
    G       A G G A
      C T A        G     TGGTGGTCAAACCACCGT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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