The detailed information of tRNA gene sequence


Sequence ID>WENV180098700
Genome IDMTBK01262501
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1158
End posion on genome 1235
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttttcaggct
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGCTAGCGTACTTGAATGGGGTTCAAGTGGTCGCAGGTTCAA
ATCCTGTCATCCCGACCA
Downstream region at tRNA end position 
tcactttcgg
Secondary structure (Cloverleaf model)
>WENV180098700	Pro	GGG
                   t      ACCA tcactttcgg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
    C T G A        A      + | | | |     A
  C         C G C G       G C A G G     C
  G         | | | +                 T T
  G         G C G T
    C T A          A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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