The detailed information of tRNA gene sequence


Sequence ID>WENV180098701
Genome IDMTBK01262582
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 277
End posion on genome 193
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttgacaacac
tRNA gene sequence 
GGCAGCTTGCCCGAGCGGCCAAAGGGAGCGGTCTGTAAAACCGTCGGCTTCGCCTTCGAT
GGTTCGAATCCATCAGCTGCCACCA
Downstream region at tRNA end position 
gttcgagagt
Secondary structure (Cloverleaf model)
>WENV180098701	Tyr	GTA
                   c      ACCA gttcgagagt
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C T A C C     A
      C G A        G      | | | | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTTCGCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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