The detailed information of tRNA gene sequence


Sequence ID>WENV180098718
Genome IDMTBK01263135
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 922
End posion on genome 996
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttccataatT
tRNA gene sequence 
GCGGGTGTAGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGTTGGGAGTTCGAGC
CTTCCCGCCCGCGTtg
Downstream region at tRNA end position 
attaattttt
Secondary structure (Cloverleaf model)
>WENV180098718	Trp	CCA
                   T      GTtg attaattttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C G
                    T     C C T T C     A
      T A A        A      | | + | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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