The detailed information of tRNA gene sequence


Sequence ID>WENV180098731
Genome IDMTBK01263774
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 112
End posion on genome 23
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgcgaacag
tRNA gene sequence 
GGAGAGATGCCAGAGTGGTCGAATGGGGCGGTCTCGAAAACCGTTGTCCTGCTTGCGCGG
GACCGGGGGTTCGAATCCCTCTCTCTCCGCag
Downstream region at tRNA end position 
acagtaaggc
Secondary structure (Cloverleaf model)
>WENV180098731	Ser	CGA
                   g      GCag acagtaaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCCTGCTTGCGCGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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