The detailed information of tRNA gene sequence


Sequence ID>WENV180098744
Genome IDMTBK01264422
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 188
End posion on genome 99
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatttattac
tRNA gene sequence 
GGAGGATTACCCAAGTCCGGCTGAAGGGAACGGTCTTGAAAACCGTCAGGCGGGTAAAAC
CGTGCAAGAGTTCGAATCTCTTATCCTCCTttt
Downstream region at tRNA end position 
tatttatttt
Secondary structure (Cloverleaf model)
>WENV180098744	Ser	TGA
                   c      Tttt tatttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C T C     A
    C T G A        A      | | | | |     G
  C         A C C C       A A G A G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGGGTAAAACCGTGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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