The detailed information of tRNA gene sequence


Sequence ID>WENV180098749
Genome IDMTBK01264988
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 143
End posion on genome 221
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accgatgagc
tRNA gene sequence 
GGGGTCGTGGTGTAGCCTGGCCAAACACGTCAGCCTGTCACGTTGAAGACCGCGGGTTCA
AATCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
aatgagtgcc
Secondary structure (Cloverleaf model)
>WENV180098749	Asp	GTC
                   c      GCCA aatgagtgcc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
    C C G A        G      + | | | |     A
  T         T G T G       G C G G G     C
  G         | | | |                 T T
  G         A C A C
    C C A A        G     AGACC
                    T - A
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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