The detailed information of tRNA gene sequence


Sequence ID>WENV180098756
Genome IDMTBK01265204
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 512
End posion on genome 421
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnntttga
tRNA gene sequence 
GGAGAGATGGCTGAGTTCGGTTGAAGGCGCTCGACTCGAAATCGAGTGAACCAGTGATGG
TTCCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gcacaattta
Secondary structure (Cloverleaf model)
>WENV180098756	Ser	CGA
                   a      GCCA gcacaattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T G A        G     TGAACCAGTGATGGTTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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