The detailed information of tRNA gene sequence


Sequence ID>WENV180098758
Genome IDMTBK01265214
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 312
End posion on genome 388
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggacaaac
tRNA gene sequence 
AGGCCAGTAGCTCGAATTGGTAGAGCGGCGGTCTCCAAAACCGCATGTTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gatccggtcc
Secondary structure (Cloverleaf model)
>WENV180098758	Trp	CCA
                   c      GCCA gatccggtcc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A G        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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