The detailed information of tRNA gene sequence


Sequence ID>WENV180098777
Genome IDMTBK01266864
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 25420
End posion on genome 25496
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atgatgaggt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCAGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
tgttttttta
Secondary structure (Cloverleaf model)
>WENV180098777	fMet	CAT
                   t      ACCA tgttttttta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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