The detailed information of tRNA gene sequence


Sequence ID>WENV180098778
Genome IDMTBK01266864
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 25510
End posion on genome 25584
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttatat
tRNA gene sequence 
GGCGGCGTAGCTCAGAGGTAGAGCAGGCGGCTCATACCCGCCGTGTCCGGGGTTCGATTC
CCTGCGCCGCCACCA
Downstream region at tRNA end position 
aaacactgct
Secondary structure (Cloverleaf model)
>WENV180098778	Met	CAT
                   t      ACCA aaacactgct
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     G T C C C     A
        G A        A      | + | | |     G
      A     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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