The detailed information of tRNA gene sequence


Sequence ID>WENV180098781
Genome IDMTBK01266864
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 51037
End posion on genome 51113
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccaaagc
tRNA gene sequence 
GGGCTCGTGGTGTAGGGGCCAAACACGCCGGCCTGTCAAGCCGGAGATCGGGGGTTCAAA
TCCCCTCGAGCCCGCCA
Downstream region at tRNA end position 
ttttagtgcc
Secondary structure (Cloverleaf model)
>WENV180098781	Asp	GTC
                   c      GCCA ttttagtgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C C C     A
      G G A        G      + | | | |     A
    G       T G T G       G G G G G     C
    G       | | | |                 T T
    C       A C A C
      C A A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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