The detailed information of tRNA gene sequence


Sequence ID>WENV180098795
Genome IDMTBK01267511
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 125
End posion on genome 52
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcaagcacac
tRNA gene sequence 
GGGCTCGTGGTCTAGTCGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCAtga
Downstream region at tRNA end position 
ttcttccttc
Secondary structure (Cloverleaf model)
>WENV180098795	Val	GAC
                   c      Atga ttcttccttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      T G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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