The detailed information of tRNA gene sequence


Sequence ID>WENV180098796
Genome IDMTBK01267545
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 996
End posion on genome 923
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
aaaattcaac
tRNA gene sequence 
TGGGGAATCGTTCAATGGTAGGACAGCGGACTCTGACTCCGTCAATCAAGGTTCGAATCC
TTGTTCCCCAGCCA
Downstream region at tRNA end position 
ttttatctcg
Secondary structure (Cloverleaf model)
>WENV180098796	Gln	CTG
                   c      GCCA ttttatctcg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G T T C C     A
        A A        C      | | | | |     G
      T     C T T G       C A A G G     C
      G     | + | |                 T T
      G     G G A C
        T A        A     CAAT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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