The detailed information of tRNA gene sequence


Sequence ID>WENV180098815
Genome IDMTBK01268508
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4761
End posion on genome 4689
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atgacaacgc
tRNA gene sequence 
CGGGCAGTAGCGCAGGGGCTAGCGCACTTGGTTCGGGACCAAGGGGTCGGAGGTTCAAAT
CCTCTCTGCCCGAtca
Downstream region at tRNA end position 
agcggtattt
Secondary structure (Cloverleaf model)
>WENV180098815	Pro	CGG
                   c      Atca agcggtattt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T C T C C     A
      G G A        A      + | | | |     A
    G       C G C G       G G A G G     C
    G       | | | |                 T T
    C       G C G C
      T A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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