The detailed information of tRNA gene sequence


Sequence ID>WENV180098834
Genome IDMTBK01269755
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 146
End posion on genome 73
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttcgcgatac
tRNA gene sequence 
GGGGCATTGGCTCAGCTGGTAGAGCGCTGCGTTCGCAATGCAGAGGTCAGCGGTTCGACC
CCGCTATGCTCCACaa
Downstream region at tRNA end position 
aagtgtcctt
Secondary structure (Cloverleaf model)
>WENV180098834	Ala	CGC
                   c      ACaa aagtgtcctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          C C
                    T     T C G C C     A
      C G A        G      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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