The detailed information of tRNA gene sequence


Sequence ID>WENV180098842
Genome IDMTBK01270326
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9374
End posion on genome 9462
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatggattc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCACGCCTGGAAAGTGTGTGTACGCCGAAAGCGT
ACCAAGGGTTCGAATCCCTTTCTCTCCGCaa
Downstream region at tRNA end position 
aaattaactt
Secondary structure (Cloverleaf model)
>WENV180098842	Ser	GGA
                   c      GCaa aaattaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTACGCCGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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