The detailed information of tRNA gene sequence


Sequence ID>WENV180098849
Genome IDMTBK01270623
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 17753
End posion on genome 17680
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cctgtttcca
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCAGCAGACTCATAATCTGTGGGTCGAAGGTTCAAG
TCCTTCTGGGCCCAtgt
Downstream region at tRNA end position 
ttcatccact
Secondary structure (Cloverleaf model)
>WENV180098849	Ile2	CAT
                   a      Atgt ttcatccact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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