The detailed information of tRNA gene sequence


Sequence ID>WENV180098852
Genome IDMTBK01271063
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 596
End posion on genome 670
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aacgcctgtc
tRNA gene sequence 
GGGCTCGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCAAC
TCTACCCGGGCCCACta
Downstream region at tRNA end position 
tggtcccaaa
Secondary structure (Cloverleaf model)
>WENV180098852	Ile	GAT
                   c      ACta tggtcccaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T C
                    T     C C A T C     A
      G G A        A      | | | | |     A
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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