The detailed information of tRNA gene sequence


Sequence ID>WENV180098857
Genome IDMTBK01271260
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 16222
End posion on genome 16149
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agttcttgat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACaa
Downstream region at tRNA end position 
aacaaataaa
Secondary structure (Cloverleaf model)
>WENV180098857	fMet	CAT
                   t      ACaa aacaaataaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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