The detailed information of tRNA gene sequence


Sequence ID>WENV180098860
Genome IDMTBK01271376
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 386
End posion on genome 461
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
taaataaaat
tRNA gene sequence 
GAGGGTATAGCTCAGCCGGCAGAGCGCTACGTTGACATCGTAGAGGTCATTGGTTCAAGT
CCAATTATCCTCACCA
Downstream region at tRNA end position 
acaaaacaag
Secondary structure (Cloverleaf model)
>WENV180098860	Val	GAC
                   t      ACCA acaaaacaag
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T          T G
                    T     T A A C C     A
      C G A        A      | | | | |     A
    C       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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