The detailed information of tRNA gene sequence


Sequence ID>WENV180098861
Genome IDMTBK01271376
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2924
End posion on genome 3020
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataattgaat
tRNA gene sequence 
GGGGGTAGATGAGTGCTGGTGTGCTCTCTGGTCTTCAAAACCAGCATGAGGGGTTAGTAG
CCTCTTGGGTGGGTTCGATTCCCACGTACTCCCGCCA
Downstream region at tRNA end position 
atcggataaa
Secondary structure (Cloverleaf model)
>WENV180098861	SeC	TCA
                   t      GCCA atcggataaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G   G          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G T          T     CATGAGGGGTTAGTAGCCTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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