The detailed information of tRNA gene sequence


Sequence ID>WENV180098866
Genome IDMTBK01271940
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1512
End posion on genome 1601
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtaaaaccgc
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGTTGAATGGGACGGTCTCGAAAACCGTTGTATCCTTACGGGTA
CCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
ccttcttgcc
Secondary structure (Cloverleaf model)
>WENV180098866	Ser	CGA
                   c      GCCA ccttcttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTATCCTTACGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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