The detailed information of tRNA gene sequence


Sequence ID>WENV180098874
Genome IDMTBK01272579
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2678
End posion on genome 2588
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcattgtcga
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCGTGTGAGCGT
ACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aagcaattaa
Secondary structure (Cloverleaf model)
>WENV180098874	Ser	TGA
                   a      GCCA aagcaattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G T G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTGCGTGTGAGCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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