The detailed information of tRNA gene sequence


Sequence ID>WENV180098875
Genome IDMTBK01272579
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1485
End posion on genome 1395
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcattgtcga
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCGTGTGAGCGT
ACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
cataacttta
Secondary structure (Cloverleaf model)
>WENV180098875	Ser	TGA
                   a      GCCA cataacttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G T G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTGCGTGTGAGCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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