The detailed information of tRNA gene sequence


Sequence ID>WENV180098876
Genome IDMTBK01272579
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1362
End posion on genome 1272
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaggcacat
tRNA gene sequence 
GGAGAAATACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGCGTAGGTCGGGCAACTGG
CGCCCGGGTTCAAATCCCGGTTTCTCCGCCA
Downstream region at tRNA end position 
taagacatct
Secondary structure (Cloverleaf model)
>WENV180098876	Ser	GCT
                   t      GCCA taagacatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       A C T C       C C G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGCAACTGGCGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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