The detailed information of tRNA gene sequence


Sequence ID>WENV180098877
Genome IDMTBK01272670
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 741
End posion on genome 828
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggccaacct
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCACGCTTGGAAAGCGTGTTGAGTGAAAGCTCTC
AGGGGTTCGAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
acgccgtccc
Secondary structure (Cloverleaf model)
>WENV180098877	Ser	GGA
                   t      GCCA acgccgtccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGAGTGAAAGCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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