The detailed information of tRNA gene sequence


Sequence ID>WENV180098880
Genome IDMTBK01272829
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 478
End posion on genome 554
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctatttaaaa
tRNA gene sequence 
GGGGTCGTAGTTCAACTGGTTAGAGCACCGGCCTGTCACGCCGGGGGTTGCGGGTTCGAG
TCCCGTCGATCCCGCCA
Downstream region at tRNA end position 
attctcccag
Secondary structure (Cloverleaf model)
>WENV180098880	Asp	GTC
                   a      GCCA attctcccag
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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