The detailed information of tRNA gene sequence


Sequence ID>WENV180098883
Genome IDMTBK01273028
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 530
End posion on genome 458
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctttgagaac
tRNA gene sequence 
GGGGTTATAGCTCAATTGGTAGAGCACCAGATTTGCATTCTGGGGGTTTGGAGTTCGAGT
CTCCATAGCTCCAtaa
Downstream region at tRNA end position 
tctcaaaaat
Secondary structure (Cloverleaf model)
>WENV180098883	Ala	TGC
                   c      Ataa tctcaaaaat
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     A - T          T G
                    T     A C C T C     A
      T A A        A      | | | | |     G
    T       C T C G       T G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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