The detailed information of tRNA gene sequence


Sequence ID>WENV180098902
Genome IDMTBK01274014
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 146
End posion on genome 57
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttcccggc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCTAAGGAGCACGCCTCGAAAGCGTGTGTGGGTGCAAGCCCA
CCGTGGGTTCAAATCCCACCGCCACCGCCA
Downstream region at tRNA end position 
acgcaaaacc
Secondary structure (Cloverleaf model)
>WENV180098902	Ser	CGA
                   c      GCCA acgcaaaacc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGTGGGTGCAAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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