The detailed information of tRNA gene sequence


Sequence ID>WENV180098905
Genome IDMTBK01274121
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 521
End posion on genome 594
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttattccca
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACATCGCCTTCACACGGCGGAGATCACGCGTTCGAA
TCGCGTCGGGCCCAttt
Downstream region at tRNA end position 
cggaactgga
Secondary structure (Cloverleaf model)
>WENV180098905	Val	CAC
                   a      Attt cggaactgga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     AGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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