The detailed information of tRNA gene sequence


Sequence ID>WENV180098909
Genome IDMTBK01274393
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 886
End posion on genome 799
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttggaaaa
tRNA gene sequence 
GGAAAGTTGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTACTCTTGCGGGTA
CCAAGGGTTCGAATCCCTTTCTTTCCGCaa
Downstream region at tRNA end position 
acaagggtgt
Secondary structure (Cloverleaf model)
>WENV180098909	Ser	CGA
                   a      GCaa acaagggtgt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T   T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       A A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACTCTTGCGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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