The detailed information of tRNA gene sequence


Sequence ID>WENV180098916
Genome IDMTBK01274979
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2338
End posion on genome 2429
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tctgagaaac
tRNA gene sequence 
GGAAGGGTGTCCGAGTCCGGTTGAAGGAGCTCGACTCGAAATCGAGTTGGCAGGAAGCTG
CCACGGGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
gaagatattt
Secondary structure (Cloverleaf model)
>WENV180098916	Ser	CGA
                   c      GCCA gaagatattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G C C T       G G G G G     C
  G           | | |                 T T
  G         A G G A
    T T G A        G     TTGGCAGGAAGCTGCCAC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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