The detailed information of tRNA gene sequence


Sequence ID>WENV180098919
Genome IDMTBK01275232
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 533
End posion on genome 606
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattctatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACga
Downstream region at tRNA end position 
aggatnnnnn
Secondary structure (Cloverleaf model)
>WENV180098919	fMet	CAT
                   t      ACga aggatnnnnn
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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