The detailed information of tRNA gene sequence


Sequence ID>WENV180098924
Genome IDMTBK01275580
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1422
End posion on genome 1498
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
acaatcgctc
tRNA gene sequence
GGGGGCGTGGTGTAGTGGTTCAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCAAA
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position
aaaaatccac
Secondary structure (Cloverleaf model)
>WENV180098924	Asp	GTC
                   c      GCCA aaaaatccac
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T C A        G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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