The detailed information of tRNA gene sequence


Sequence ID>WENV180098937
Genome IDMTBK01276557
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1183
End posion on genome 1259
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atccactttT
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGATATCCCGACGGGCTCATAACCCGTAGACCGATGGTTCAA
ATCCATTCCTCGCTATac
Downstream region at tRNA end position 
ttcttttagg
Secondary structure (Cloverleaf model)
>WENV180098937	fMet	CAT
                   T      ATac ttcttttagg
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T A C C     A
    C T G A        G      + | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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