The detailed information of tRNA gene sequence


Sequence ID>WENV180098948
Genome IDMTBK01277357
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 462
End posion on genome 535
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcgccgcttt
tRNA gene sequence 
CTCTTCGTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCGTGAGTTCGAGT
CTCACCGAGGAGACtg
Downstream region at tRNA end position 
aaaattaagc
Secondary structure (Cloverleaf model)
>WENV180098948	Lys	CTT
                   t      ACtg aaaattaagc
                     C - G
                     T - A
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          T G
                    T     C A C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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