The detailed information of tRNA gene sequence


Sequence ID>WENV180098949
Genome IDMTBK01277639
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 17141
End posion on genome 17065
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acagcgattt
tRNA gene sequence 
GGCGCAGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
CCCCTTCTGCGTCGCCA
Downstream region at tRNA end position 
caattgccgg
Secondary structure (Cloverleaf model)
>WENV180098949	Asp	GTC
                   t      GCCA caattgccgg
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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