The detailed information of tRNA gene sequence


Sequence ID>WENV180098951
Genome IDMTBK01277806
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 33
End posion on genome 123
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaagcatac
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGCTGAAGGCACCGGTCTTGAAAACCGGCGAGGATGCAAGTCC
TCCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gatttttgcg
Secondary structure (Cloverleaf model)
>WENV180098951	Ser	TGA
                   c      GCCA gatttttgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G C G G G     C
  G           | + |                 T T
  C         A G G C
    T G A          A     CGAGGATGCAAGTCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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