The detailed information of tRNA gene sequence


Sequence ID>WENV180098955
Genome IDMTBK01278026
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 210
End posion on genome 137
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcttctttct
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTAGTCTCCAAAACTAGGTGTCGGGCGTTCGAGT
CGCTCCTCCCGTGCaa
Downstream region at tRNA end position 
acgagatatt
Secondary structure (Cloverleaf model)
>WENV180098955	Trp	CCA
                   t      GCaa acgagatatt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C G C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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