The detailed information of tRNA gene sequence


Sequence ID>WENV180098960
Genome IDMTBK01278528
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4783
End posion on genome 4711
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcccaaatc
tRNA gene sequence 
GGCCAGTTCGTCTAACGGTTAGGACTCAAGATTTTCATTCTTGCAATAGGGGTTCGATTC
CCCTACTGGCTACaa
Downstream region at tRNA end position 
aataactgaa
Secondary structure (Cloverleaf model)
>WENV180098960	Glu	TTC
                   c      ACaa aataactgaa
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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