The detailed information of tRNA gene sequence


Sequence ID>WENV180098961
Genome IDMTBK01278909
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 562
End posion on genome 489
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aacgatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTTAGTTCGAAT
CTAACCCCCGCTACta
Downstream region at tRNA end position 
aaaaagaggc
Secondary structure (Cloverleaf model)
>WENV180098961	fMet	CAT
                   t      ACta aaaaagaggc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A T C     A
      C G A        G      | | | | |     G
    T       C G A G       G T T A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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