The detailed information of tRNA gene sequence


Sequence ID>WENV180098966
Genome IDMTBK01278929
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 344995
End posion on genome 344920
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
taattcggta
tRNA gene sequence 
GCCCTTGTAGCTCAACGGTTAGAGCAGCGGACTCATAATCCGTTGGTTGTAGGTTCGAAT
CCTACCGAGGGCACCA
Downstream region at tRNA end position 
ctctctacac
Secondary structure (Cloverleaf model)
>WENV180098966	Ile2	CAT
                   a      ACCA ctctctacac
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T A
                    T     C A T C C     A
      C A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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