The detailed information of tRNA gene sequence


Sequence ID>WENV180098967
Genome IDMTBK01278929
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 214007
End posion on genome 213932
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
attgcggttc
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCGCATGAATGGCATTCATGAGGTCAGGGGTTCGATC
CCCCTCGTCTCCACCA
Downstream region at tRNA end position 
atattatcaa
Secondary structure (Cloverleaf model)
>WENV180098967	Ala	GGC
                   c      ACCA atattatcaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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