The detailed information of tRNA gene sequence


Sequence ID>WENV180098968
Genome IDMTBK01278929
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10418
End posion on genome 10321
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttgcaatgc
tRNA gene sequence 
GGAGGCGCGGCTTGTCCGGTGATGGGCGCGGTCTTCAAAACCGTTGTGACGGCGCGAGAG
CGTCGTTAGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
agattacgaa
Secondary structure (Cloverleaf model)
>WENV180098968	SeC	TCA
                   c      GCCA agattacgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    G     C A C C C     A
      C C T        G      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G A          C     TGTGACGGCGCGAGAGCGTCGTTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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