The detailed information of tRNA gene sequence


Sequence ID>WENV180098983
Genome IDMTBK01280133
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 17388
End posion on genome 17462
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaaaaagcg
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC
TCCCTTATTCTCCACtc
Downstream region at tRNA end position 
tgctctactt
Secondary structure (Cloverleaf model)
>WENV180098983	Ala	TGC
                   g      ACtc tgctctactt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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