The detailed information of tRNA gene sequence


Sequence ID>WENV180098990
Genome IDMTBK01280574
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 288
End posion on genome 199
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taagcattac
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGCTTAAGGAGCACGCCTGGAAAGCGTGTGTACGGGAAACTGTA
TCGAGGGTTCGAATCCCTTGCTCTCCGCCA
Downstream region at tRNA end position 
aaaaatatta
Secondary structure (Cloverleaf model)
>WENV180098990	Ser	GGA
                   c      GCCA aaaaatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTACGGGAAACTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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