The detailed information of tRNA gene sequence


Sequence ID>WENV180098993
Genome IDMTBK01280727
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 25143
End posion on genome 25228
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acatcatgat
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCTATGGCGGCGGTCTTGAAAACCGTTGACCGAAAGGTTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gatcaaacag
Secondary structure (Cloverleaf model)
>WENV180098993	Ser	TGA
                   t      GCCA gatcaaacag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TGACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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