The detailed information of tRNA gene sequence


Sequence ID>WENV180098996
Genome IDMTBK01280850
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 106
End posion on genome 178
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgttgtgac
tRNA gene sequence 
GGGTGGTTAGCTCAGTGGGAGAGCATCGCATTCACATTGCGAGGGTCATAGGTTCAAATC
CTATACCGCCCACtt
Downstream region at tRNA end position 
tcaaaaaatg
Secondary structure (Cloverleaf model)
>WENV180098996	Val	CAC
                   c      ACtt tcaaaaaatg
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C
                     T - A          T A
                    T     T A T C C     A
        G A        A      | | | | |     A
      T     C T C G       A T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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