The detailed information of tRNA gene sequence


Sequence ID>WENV180098997
Genome IDMTBK01280939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 19567
End posion on genome 19641
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gccactgcag
tRNA gene sequence 
GCGCCCGTGGTGAAAGGGATATCACGCAGGCCTCCGGAGCCTGAAGTCGGGGTTCGAATC
CCTGCGGGCGCACCA
Downstream region at tRNA end position 
ggcaaccctc
Secondary structure (Cloverleaf model)
>WENV180098997	Arg	CCG
                   g      ACCA ggcaaccctc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G T C C C     A
      G A A        G      | + | | |     G
    G       A G T G       C G G G G     C
    G       | | | |                 T T
    A       T C A C
      T A          G     AAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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